Schema informationΒΆ

Schema Filename Worksheet Name Collection Name(s)
analysis_step.json AnalysisStep analysis-steps, analysis_step
award.json Award award(s)
biosample.json Biosample biosample(s)
biosample_cell_culture.json BiosampleCellCulture biosample-cell-cultures, biosample_cell_culture
biosource.json Biosource biosource(s)
construct.json Construct construct(s)
document.json Document document(s)
enzyme.json Enzyme enzyme(s)
experiment_atacseq.json ExperimentAtacseq experiments-atacseq, experiment_atacseq
experiment_capture_c.json ExperimentCaptureC experiments-capture-c, experiment_capture_c
experiment_chiapet.json ExperimentChiapet experiments-chiapet, experiment_chiapet
experiment_hi_c.json ExperimentHiC experiments-hi-c, experiment_hi_c
experiment_mic.json ExperimentMic experiments-mic, experiment_mic
experiment_repliseq.json ExperimentRepliseq experiments-repliseq, experiment_repliseq
experiment_seq.json ExperimentSeq experiments-seq, experiment_seq
experiment_set.json ExperimentSet experiment-sets, experiment_set
experiment_set_replicate.json ExperimentSetReplicate experiment-set-replicates, experiment_set_replicate
file_calibration.json FileCalibration files-calibration, file_calibration
file_fastq.json FileFastq files-fastq, file_fastq
file_processed.json FileProcessed files-processed, file_processed
file_reference.json FileReference files-reference, file_reference
file_set.json FileSet file-sets, file_set
file_set_calibration.json FileSetCalibration file-set-calibrations, file_set_calibration
genomic_region.json GenomicRegion genomic-regions, genomic_region
image.json Image image(s)
imaging_path.json ImagingPath imaging-paths, imaging_path
individual_human.json IndividualHuman individuals-human, individual_human
individual_mouse.json IndividualMouse individuals-mouse, individual_mouse
lab.json Lab lab(s)
modification.json Modification modification(s)
ontology.json Ontology ontology(s)
ontology_term.json OntologyTerm ontology-terms, ontology_term
organism.json Organism organism(s)
protocol.json Protocol protocol(s)
publication.json Publication publication(s)
publication_tracking.json PublicationTracking publication-trackings, publication_tracking
quality_metric_bamqc.json QualityMetricBamqc quality-metrics-bamqc, quality_metric_bamqc
quality_metric_fastqc.json QualityMetricFastqc quality-metrics-fastqc, quality_metric_fastqc
quality_metric_flag.json QualityMetricFlag quality-metric-flags, quality_metric_flag
quality_metric_pairsqc.json QualityMetricPairsqc quality-metrics-pairsqc, quality_metric_pairsqc
software.json Software software(s)
sop_map.json SopMap sop-maps, sop_map
summary_statistic.json SummaryStatistic summary-statistics, summary_statistic
summary_statistic_hi_c.json SummaryStatisticHiC summary-statistics-hi-c, summary_statistic_hi_c
target.json Target target(s)
treatment_agent.json TreatmentAgent treatments-agent, treatment_agent
treatment_rnai.json TreatmentRnai treatments-rnai, treatment_rnai
user.json User user(s)
vendor.json Vendor vendor(s)
workflow.json Workflow workflow(s)
workflow_mapping.json WorkflowMapping workflow-mappings, workflow_mapping
workflow_run.json WorkflowRun workflow-runs, workflow_run
workflow_run_sbg.json WorkflowRunSbg workflow-runs-sbg, workflow_run_sbg